Benjamin Irving

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Selected Publications

Pieces-of-parts for supervoxel segmentation with global context: Application to DCE-MRI tumour delineation
Irving, B; Franklin, JM; Papiez, BW; Anderson, EM; Sharma, RA; Gleeson, FV; Brady, M; and Schnabel, JA.
Journal of Medical Image analysis 2016 (accepted)
[PDF] [Supplementary] [Code1, Code2 ]
Automated colorectal tumour segmentation in DCE-MRI using supervoxel neighbourhood contrast characteristics
Irving, B; Franklin, JM; Papiez, BW; Anderson, EM; Sharma, RA; Gleeson, FV; Brady, M; and Schnabel, JA.
MICCAI 2014
[PDF] [Supplementary] [Poster] [Link]
Computer Assisted Detection of Abnormal Airway Variation in CT Scans related to Paediatric Tuberculosis
Irving, B ; Goussard, P; Andronikou, S; Gie, R; Douglas, TS; Todd-Pokropek, A
Medical Image Analysis 2014
[PDF] [Supplementary] [Link]

Publications

Journal articles and peer-reviewed full conference papers

Irving, B; Franklin, JM; Papiez, BW; Anderson, EM; Sharma, RA; Gleeson, FV; Brady, M; and Schnabel, JA. Pieces-of-parts for supervoxel segmentation with global context: Application to DCE-MRI tumour delineation. Medical Image Analysis. 2016 , 32, 69 - 83.
[Published Link]
Brady, M; Highnam, R; Irving, B; and Schnabel, JA. Oncological Image Analysis. Medical Image analysis. 2016 (accepted).
Kallehauge, J; Irving, B; Sourbron, S; Tanderup, K; Schnabel, J; and Chappell, M. Comparison of Linear and Non-Linear Implementation of the Compartmental Tissue Uptake Model for Dynamic Contrast-Enhanced Magnetic Resonance Imaging. Magnetic Resonance in Medicine. 2016 (accepted).
Bates, R; Risser, L; Irving, B; Papiez, BW; Kannan, P; Kersemans, V; and Schnabel, JA. Filling Large Discontinuities in 3D Vascular Networks Using Skeleton-and Intensity-Based Information. In Medical Image Computing and Computer-Assisted Intervention 2015 (pp. 157-164). Springer International Publishing.
Kersemans, V; Kannan, P; Beech, JS; Bates, R; Irving, B; Gilchrist, S; Allen, PD;, Thompson, J; Kinchesch, P; Casteleyn, C; Schnabel, J; Partirdge, M, Muschel, RJ; and Smart, SC. Improving In Vivo High-Resolution CT Imaging of the Tumour Vasculature in Xenograft Mouse Models through Reduction of Motion and Bone-Streak Artefacts. PloS one. 2015, 10, e0128537.
Irving, B ; Cifor, A; Papiez, BW; Franklin, J; Anderson, EM; Brady, M; & Schnabel, JA. Automated colorectal tumour segmentation in DCE-MRI using supervoxel neighbourhood contrast characteristics. MICCAI, 2014, 8673, 609-616.
[Supplementary material]
Irving, B ; Goussard, P; Andronikou, S; Gie, R; Douglas, TS; Todd-Pokropek, A & Taylor, P. Computer Assisted Detection of Abnormal Airway Variation in CT Scans related to Paediatric Tuberculosis. Medical Image Analysis, 2014, 18, 963-976.
[Published link] , [Supplementary material] , [PDF]
Perks, TD; Dendere R; Irving, B ; Hartley, T; Scholtz, P; Lawson, A;, Trauernicht, C; Steiner, S; and Douglas, TS; Filtration to reduce paediatric dose for a linear slot-scanning digital X-ray machine. Radiation Protection Dosimetry 2014, in press.
Andronikou, S.; Irving, B.; Hlabangana, L.; Pillay, T.; Taylor, P.; Goussard, P. & Gie, R. Technical developments in postprocessing of paediatric airway imaging. Pediatric Radiology, 2013, 43, 269-284 ( Published link )
Lo, P.; van Ginneken, B.; Reinhardt, J. M.; Yavarna, T.; de Jong, P. A.; Irving, B.; Fetita, C.; Ortner, M.; Pinho, R.; Sijbers, J.; Feuerstein, M.; Fabijanska, A.; Bauer, C.; Beichel, R.; Mendoza, C. S.; Wiemker, R.; Lee, J.; Reeves, A. P.; Born, S.; Weinheimer, O.; van Rikxoort, E. M.; Tschirren, J.; Mori, K.; Odry, B.; Naidich, D. P.; Hartmann, I.; Hoffman, E. A.; Prokop, M.; Pedersen, J. H. & de Bruijne, M. Extraction of Airways From CT (EXACT'09) IEEE Transactions on Medical Imaging, 2012, 31, 2093 -2107 ( Published link )
Irving, B.; Goussard, P.; Gie, R.; Todd-Pokropek, A. & Taylor, P. Identification of paediatric tuberculosis from airway shape features . Proc. Medical Image Computing and Computer Assisted Interventions (MICCAI), 2011, 14, 133-140. ( Published link , PDF, Poster)
Irving, B.; Goussard, P.; Gie, R.; Todd-Pokropek, A. & Taylor, P. Segmentation of obstructed airway branches in CT using airway topology and statistical shape analysis. Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), 2011, 447-451 ( Published link , PDF)
Irving, B.; Maree, G.; Hering, E. & Douglas, T. Radiation dose from a linear slit scanning X-ray machine with full-body imaging capabilities . Radiation Protection Dosimetry, 2008, 130, 482-489.
Maree, G.; Irving, B. & Hering, E. Paediatric dose measurement in a full-body digital radiography unit. Pediatric Radiology, 2007, 37, 990-997

Book chapters and peer-reviewed workshop papers

Benjamin Irving , Lydia Tanner, Monica Enescu, Manav Bhushan, Esme J Hill, Jamie Franklin, Ewan M Anderson, Ricky A Sharma, Julia A Schnabel, Michael Brady. 2D X-ray airway tree segmentation by 3D deformable model projection and registration . Proc. Abdominal Imaging. Computation and Clinical Applications, 2013
( Published link , PDF)
Irving, B.; Douglas, T.S. & Taylor, P. 2D X-ray airway tree segmentation by 3D deformable model projection and registration . Proc. of Fifth International Workshop on Pulmonary Image Analysis, 2013
( PDF)
Download Projection code (one component of the algorithm)
Irving, B.; Todd-Pokropek, A. & Taylor, P. El-Baz, A. & Suri, J. (Eds.) Airway Segmentation and Analysis from Computed Tomography. Lung Imaging and Computer Aided Diagnosis, CRC press, 2011.
Irving, B.; Taylor, P. & Todd-Pokropek, A. 3D segmentation of the airway tree using a morphology based method. Proc. of Second International Workshop on Pulmonary Image Analysis, 2009, 297-307.
( PDF)
Download Morphology code (one component of the algorithm)

Thesis

Irving, B. Computer Assisted Detection and Modelling of Paediatric Airway Pathology from Medical Images, PhD Thesis, University College London, 2012. [PDF]